MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
19428wG2_WT2a
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 412
bases: 1,521,208 bps
CDS: 1,390
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 1,456
Total number of protein coding genes annotated/found:
1,390
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5020|JADGKU010000009.1
SEQF5020_01436
Genome Viewer
NA
AA
300/100
20021-20320
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01435
Genome Viewer
NA
AA
465/155
19564-20028
Low molecular weight protein-tyrosine-phosphatase YfkJ
SEQF5020|JADGKU010000009.1
SEQF5020_01434
Genome Viewer
NA
AA
1047/349
18435-19481
Catabolite control protein A
SEQF5020|JADGKU010000009.1
SEQF5020_01433
Genome Viewer
NA
AA
957/319
18134-17178
L-lactate dehydrogenase 1
SEQF5020|JADGKU010000009.1
SEQF5020_01432
Genome Viewer
NA
AA
258/86
16593-16850
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01431
Genome Viewer
NA
AA
1494/498
14550-16043
Vitamin B12 import ATP-binding protein BtuD
SEQF5020|JADGKU010000009.1
SEQF5020_01430
Genome Viewer
NA
AA
2028/676
12097-14124
Bacitracin export permease protein BceB
SEQF5020|JADGKU010000009.1
SEQF5020_01429
Genome Viewer
NA
AA
765/255
11340-12104
ABC transporter ATP-binding protein YxdL
SEQF5020|JADGKU010000009.1
SEQF5020_01428
Genome Viewer
NA
AA
381/127
10782-11162
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01427
Genome Viewer
NA
AA
549/183
10253-10801
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01426
Genome Viewer
NA
AA
978/326
8826-9803
Sensor histidine kinase GraS
SEQF5020|JADGKU010000009.1
SEQF5020_01425
Genome Viewer
NA
AA
669/223
8158-8826
Response regulator protein GraR
SEQF5020|JADGKU010000009.1
SEQF5020_01424
Genome Viewer
NA
AA
1383/461
6742-8124
tRNA modification GTPase MnmE
SEQF5020|JADGKU010000009.1
SEQF5020_01423
Genome Viewer
NA
AA
369/123
6234-6602
Chemotaxis protein CheY
SEQF5020|JADGKU010000009.1
SEQF5020_01422
Genome Viewer
NA
AA
894/298
5329-6222
hypothetical protein
SEQF5020|JADGKU010000009.1
SEQF5020_01421
Genome Viewer
NA
AA
336/112
4982-5317
Ribonuclease P protein component
SEQF5020|JADGKU010000009.1
SEQF5020_01420
Genome Viewer
NA
AA
135/45
4699-4833
50S ribosomal protein L34
SEQF5020|JADGKU010000009.1
SEQF5020_01419
Genome Viewer
NA
AA
1479/493
4215-2737
Chromosomal replication initiator protein DnaA
SEQF5020|JADGKU010000009.1
SEQF5020_01418
Genome Viewer
NA
AA
1140/380
2590-1451
Beta sliding clamp
SEQF5020|JADGKU010000009.1
SEQF5020_01417
Genome Viewer
NA
AA
1188/396
1436-249
putative transporter YycB
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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